BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028D12SP1|AL428907
(879 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1387 1742 0.0
>3x_Contig1387
Length = 7827
Score = 1742 bits (879), Expect = 0.0
Identities = 879/879 (100%)
Strand = Plus / Minus
Query: 1 gatcctctatagctttgtaattattacatttgaaaatgacagcacttgctccagttgaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5541 gatcctctatagctttgtaattattacatttgaaaatgacagcacttgctccagttgaga 5482
Query: 61 agccaaccagattatcaagagcaatctgtctgacggcaggctggtctgaatgcaaaaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5481 agccaaccagattatcaagagcaatctgtctgacggcaggctggtctgaatgcaaaaatg 5422
Query: 121 acactaattcttctaattccgtggacatcttccctctttatcgtatcaagtaaacgcaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5421 acactaattcttctaattccgtggacatcttccctctttatcgtatcaagtaaacgcaga 5362
Query: 181 tatttcgaacaaagatgttttattgaacaatgaaagttatagttgattagctggtgaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5361 tatttcgaacaaagatgttttattgaacaatgaaagttatagttgattagctggtgaaca 5302
Query: 241 atacctagttacaccaactgccaacgtagatatggttgatgcgatgagctgcgatgagtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5301 atacctagttacaccaactgccaacgtagatatggttgatgcgatgagctgcgatgagtt 5242
Query: 301 tgtcaaacgtttctcaagtttcgtgaaagaaaaggttcgactctttaaggcgggtaacaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5241 tgtcaaacgtttctcaagtttcgtgaaagaaaaggttcgactctttaaggcgggtaacaa 5182
Query: 361 ttacatcagcatcaaaccgacaataacagatctccatcttcaattaaatgaatagaacca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5181 ttacatcagcatcaaaccgacaataacagatctccatcttcaattaaatgaatagaacca 5122
Query: 421 ccgttagaaacagagcttttcaatctgcgattcgattgatccttaagtgctgcatttatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5121 ccgttagaaacagagcttttcaatctgcgattcgattgatccttaagtgctgcatttatc 5062
Query: 481 ataataaatcacttttattctagtcttggcttattgcaaccaattgcaatcataactacg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5061 ataataaatcacttttattctagtcttggcttattgcaaccaattgcaatcataactacg 5002
Query: 541 agataacagcattggaaaatgagttatcgcttcaccgacctaaagtcttccaaaagtgga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5001 agataacagcattggaaaatgagttatcgcttcaccgacctaaagtcttccaaaagtgga 4942
Query: 601 agtttcaacaacaacaaactactacggatacaggattctacaatgctgacagcaggactt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4941 agtttcaacaacaacaaactactacggatacaggattctacaatgctgacagcaggactt 4882
Query: 661 agtgctgggatattgcaacttcaatcttttgcaggttttggaatgttttttgctgtttat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4881 agtgctgggatattgcaacttcaatcttttgcaggttttggaatgttttttgctgtttat 4822
Query: 721 atcctggtgaacctcatatttatagcgtggttttgcaaattcaagcctagtctatatttt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4821 atcctggtgaacctcatatttatagcgtggttttgcaaattcaagcctagtctatatttt 4762
Query: 781 actaatccagtgcataaaatatgggttaaaaatctattccgcgagctagctgggtttgtc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4761 actaatccagtgcataaaatatgggttaaaaatctattccgcgagctagctgggtttgtc 4702
Query: 841 atgacttggacgttagcgttcactttggtcaggtaacgc 879
|||||||||||||||||||||||||||||||||||||||
Sbjct: 4701 atgacttggacgttagcgttcactttggtcaggtaacgc 4663
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7227
Number of Sequences: 1807
Number of extensions: 7227
Number of successful extensions: 60
Number of sequences better than 1.0e-20: 1
length of query: 879
length of database: 10,358,551
effective HSP length: 16
effective length of query: 863
effective length of database: 10,329,639
effective search space: 8914478457
effective search space used: 8914478457
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)